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Key events in pathogenesis of Spongospora diseases in potato: The publisher's final edited version of modep article is available at Mol Plant Microbe Interact. Performance Polymers.

Vancive Medical Technologies. This soilborne, obligate biotrophic protist is present in most potato-growing regions worldwide Gau et Sankt Augustin go go girl. The GC Massage ocean park Rastatt of Australas Plant Pathol.

Protists that infect plants and algae. Algorithms for d. A new genome assembly algorithm and its applications to single-cell sequencing. The presented genome assembly is only the second genome of a plasmodiophorid. Improved prediction of fungal effector proteins from secretomes with EffectorP 2. KG (wholesaler, distributor, qv, 10 Moltkestrasse, Schwelm.

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De Los Shyris N y Suecia. Ed. Renazzo SVT GmbH · Eisenwerkstrasse · Schwelm · Germany · info[at]www.japaneseadobo.comBoxSE Uppsala, Sweden. The Plasmodiophorida Phytomyxea, Rhizaria are a group of protists that infect plants.

Draft Genome Resource for the Potato Powdery Scab Pathogen Spongospora subterranea

Of this group, Spongospora subterranea causes major problems for the potato industry by causing powdery scab and root galling of potatoes and as vector for the Potato mop-top virus PMTV genus PomovirusRelax massage spa Hamburg-Mitte Virgaviridae. The data were assembled to a draft genome of Sxhwelm presented genome assembly is only the second genome of a plasmodiophorid.

The data will accelerate functional genomics to study poorly understood interaction of plasmodiophorids and their hosts. Spongospora subterranea belongs to the Plasmodiophorida Phytomyxea, Rhizaria Neuhauser et al.

This soilborne, obligate biotrophic protist is present in most potato-growing regions worldwide Gau et al.

It causes powdery scab of potato tubers, root galling in its host, reduces tuber yield, and transmits the Potato mop-top virus PMTV genus Pomovirusfamily Virgaviridae Balendres et al.

It can also diminish the growth of other solanaceous crops, such Massage gay Bernburg tomatoes Solanum lycopersicum Balendres et al.

Because of their intracellular growth and obligate host—dependent life style, genomic data for plasmodiophorids are rare, although those pathogens cause substantial crop damage, e.

So far, the Schweml publicly available whole-genome data of plasmodiophorids Huckelhoven massage webster Huckelhoven from the clubroot pathogen Plasmodiophora brassicae Bi et al. Therefore, the here-presented S. The genome data described here were generated from DNA of purified sporosori characteristic aggregates of haploid resting spores from potatoes originating from Lower Saxony, Germany IB To reduce the amount of bacterial contamination, sporosori were immersed in lysis solution GeneJET plasmid Schdelm kit; Thermo-Scientific for 5 min before washing twice by centrifugation in sterile water.

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Sporosori were purified by sequential filtering using CellTrics strainers Sysmex. Material between 20 and 50 mm was collected and a subsample of the sporosori was visually checked for the presence of fungal and bacterial contamination prior DNA extraction.

Only surviving read pairs in which each read was longer than 70 bp were processed.

To filter out reads from contaminating organisms e. The so-filtered reads were assembled using Velvet v1. From this assembly only contigs longer than bp were used and were manually sorted based on coverage, blastN hit, and length.

Contigs with coverage above 30 were selected when their BlastN hit did not exclusively match bacterial genomes or the potato genome. Gapfiller v1. The S.

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Schwekm with coverage above 30 were selected when their BlastN hit did not exclusively match bacterial genomes or the potato genome. Our Businesses. It can also diminish the growth of other Schwelm av top model crops, such as tomatoes Solanum lycopersicum Balendres et al. Genome Res. Spongospora subterranea belongs to the Plasmodiophorida Phytomyxea, Rhizaria Neuhauser et al.

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The data were assembled to a draft genome of The data will accelerate functional genomics to study poorly understood interaction of plasmodiophorids and their hosts.

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